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All functions

add_hazards() add_hazards_()
Add Hazards
apply_af()
Apply an Acceleration Factor
apply_hr()
Apply a Hazard Ratio
apply_or()
Apply an Odds Ratio
apply_shift()
Apply a time shift to a survival distribution
calibrate_model()
Calibrate Model Parameters
use_cluster() status_cluster() close_cluster()
Run heemod on a Cluster
combine_probs()
Combine Probabilities
compute_surv()
Evaluate Survival Distributions
construct_part_surv_tib()
construct a survival object from tabular specification
define_calibration_fn()
Define Calibration Function
define_correlation() define_correlation_()
Define a Correlation Structure for Probabilistic Uncertainty Analysis
define_dsa() define_dsa_()
Define a Sensitivity Analysis
define_inflow() define_inflow_()
Define Inflow for a BIA
define_init() define_init_()
Define Initial Counts
define_parameters() define_parameters_() modify(<uneval_parameters>)
Define Markov Model Parameters
define_part_surv() define_part_surv_()
Define Partitioned Survival
define_psa() define_psa_()
Define Parameters Distribution for Probabilistic Analysis
define_starting_values() define_starting_values_()
Define Starting State Values
define_state() define_state_() modify(<state>)
Define a Markov Model State
define_strategy() define_strategy_()
Define a Markov Model
define_surv_dist()
Define a Survival Distribution
define_surv_fit()
Define a Fitted Survival Model
define_surv_spline()
Define a Restricted Cubic Spline Survival Distribution
define_surv_table()
Define a survival distribution based on explicit survival probabilities
define_transition() define_transition_() modify(<uneval_matrix>) plot(<uneval_matrix>)
Define Transition Matrix for Markov Model
dispatch_strategy()
Dispatch Values According to Strategy
normal() lognormal() gamma() binomial() multinomial() logitnormal() beta() triangle() poisson() define_distribution() use_distribution()
Probability Density Functions for Probabilistic Uncertainty Analysis
export_savi()
Export PSA Results for SAVI
get_counts()
Get State Membership Counts
get_values()
Get Strategy Values
join() join_()
Project Beyond a Survival Distribution with Another
load_surv_models()
Load a set of survival fits
look_up()
Look Up Values in a Data Frame
mix() mix_()
Mix Two or More Survival Distributions
modify()
Modify Object
part_survs_from_surv_inputs()
Convert saved fits to partitioned survival objects
plot(<dsa>)
Plot Sensitivity Analysis
plot(<psa>)
Plot Results of Probabilistic Analysis
plot(<run_model>)
Plot Results of a Markov Model
plot(<surv_object>)
Plot general survival models
rescale_prob() prob_to_prob() rate_to_prob() or_to_prob() rr_to_prob()
Convenience Functions to Compute Probabilities
reindent_transition()
Reindent Transition Matrix
rescale_discount_rate()
Rescale Discount Rate
run_bcea()
Use the BCEA package
run_dsa()
Run Sensitivity Analysis
run_model() run_model_()
Run Markov Model
run_model_tabular()
Run Analyses From Files
run_psa()
Run Probabilistic Uncertainty Analysis
set_covariates() set_covariates_()
Set Covariates of a Survival Distribution
summary(<run_model>)
Summarise Markov Model Results
summary(<surv_shift>)
Summarize surv_shift objects
update(<run_model>) plot(<updated_model>)
Run Model on New Data
get_who_mr_memo() get_who_mr()
Use WHO Mortality Rate