Data Management with FHIR
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: Cette ressource présente les spécifications de l''alignement entre les ressources FHIR vers les tables correspodantes du CDM OMOP. - XML Representation

Draft as of 2025-10-23

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<StructureMap xmlns="http://hl7.org/fhir">
  <id value="CoreFHIR2OMOP"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Narratif généré : StructureMap CoreFHIR2OMOP</b></p><a name="CoreFHIR2OMOP"> </a><a name="hcCoreFHIR2OMOP"> </a><pre class="fml">
<b>map</b><span style="color: navy"> &quot;</span>https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOP<span style="color: navy">&quot; = &quot;</span>CoreFHIR2OMOP<span style="color: navy">&quot;

</span><span style="color: navy">// </span><span style="color: green">Cette ressource présente les spécifications de l''alignement entre les ressources FHIR vers les tables correspodantes du CDM OMOP.</span>

<b>uses</b><span style="color: navy"> &quot;</span><a href="http://hl7.org/fhir/R4/bundle.html" title="Bundle">http://hl7.org/fhir/StructureDefinition/Bundle</a><span style="color: navy">&quot; </span><b>alias </b>Bundle <b>as </b><b>source</b>
<b>uses</b><span style="color: navy"> &quot;</span><a href="http://hl7.org/fhir/R4/patient.html" title="Patient">http://hl7.org/fhir/StructureDefinition/Patient</a><span style="color: navy">&quot; </span><b>alias </b>Patient <b>as </b><b>source</b>
<b>uses</b><span style="color: navy"> &quot;</span><a href="StructureDefinition-LogicalBundle.html" title="LogicalBundle">https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/LogicalBundle</a><span style="color: navy">&quot; </span><b>alias </b>LogicalBundle <b>as </b><b>target</b>

<b>imports</b><span style="color: navy"> &quot;</span><a href="StructureMap-CoreFHIRPatient2OMOP.html" title="Cette ressource présente les spécifications de l''alignement entre la ressource `Patient` vers les tables correspodantes du CDM OMOP.">https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIRPatient2OMOP</a><span style="color: navy">&quot;
</span>
<b>group </b>Bundle<span style="color: navy">(</span><b>source</b> <span style="color: maroon">src</span><span style="color: navy"> : </span>Bundle, <b>target</b> <span style="color: maroon">tgtBundle</span><span style="color: navy"> : </span>LogicalBundle<span style="color: navy">)</span><b> &lt;&lt;types&gt;&gt;</b><span style="color: navy"> {
</span>  src<span style="color: navy"><b> -&gt; </b></span>tgtBundle.logicalId = <b>uuid</b><span style="color: navy">(</span><span style="color: navy">)</span> <i>&quot;setId&quot;</i><span style="color: navy">;</span>
  src<span style="color: navy"><b> -&gt; </b></span>tgtBundle.type = <span style="color: blue">'transaction'</span> <i>&quot;setType&quot;</i><span style="color: navy">;</span>
  src.entry<b> as </b><span style="color: maroon">srcEntry</span><b> where </b>srcEntry.resource.is(FHIR.Patient)<b> then</b><span style="color: navy"> {
</span>    srcEntry.resource<b> as </b><span style="color: maroon">srcResource</span><span style="color: navy"><b> -&gt; </b></span><span style="color: navy">(</span>%srcResource.as(FHIR.Patient)<span style="color: navy">)</span><b> as </b><span style="color: maroon">srcPatient</span><b> then </b>Patient<span style="color: navy">(</span><span style="color: maroon">srcPatient</span><span style="color: navy">, </span><span style="color: maroon">tgtBundle</span><span style="color: navy">)</span> <i>&quot;addPatient&quot;</i><span style="color: navy">;</span>
  <span style="color: navy">}</span> <i>&quot;entryLoop4Patient&quot;</i><span style="color: navy">;</span>
<span style="color: navy">}

</span></pre></div>
  </text>
  <url value="https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIR2OMOP"/>
  <version value="0.1.0"/>
  <name value="CoreFHIR2OMOP"/>
  <title
         value="Cette ressource présente les spécifications de l''alignement entre les ressources FHIR vers les tables correspodantes du CDM OMOP."/>
  <status value="draft"/>
  <date value="2025-10-23T20:49:03+00:00"/>
  <publisher value="AP-HP"/>
  <contact>
    <name value="AP-HP"/>
    <telecom>
      <system value="url"/>
      <value value="https://aphp.fr"/>
    </telecom>
  </contact>
  <description
               value="Cette ressource présente les spécifications de l''alignement entre les ressources FHIR vers les tables correspodantes du CDM OMOP."/>
  <jurisdiction>
    <coding>
      <system value="urn:iso:std:iso:3166"/>
      <code value="FR"/>
      <display value="France"/>
    </coding>
  </jurisdiction>
  <structure>
    <url value="http://hl7.org/fhir/StructureDefinition/Bundle"/>
    <mode value="source"/>
    <alias value="Bundle"/>
  </structure>
  <structure>
    <url value="http://hl7.org/fhir/StructureDefinition/Patient"/>
    <mode value="source"/>
    <alias value="Patient"/>
  </structure>
  <structure>
    <url
         value="https://interop.aphp.fr/ig/fhir/dm/StructureDefinition/LogicalBundle"/>
    <mode value="target"/>
    <alias value="LogicalBundle"/>
  </structure>
  <import
          value="https://interop.aphp.fr/ig/fhir/dm/StructureMap/CoreFHIRPatient2OMOP"/>
  <group>
    <name value="Bundle"/>
    <typeMode value="types"/>
    <input>
      <name value="src"/>
      <type value="Bundle"/>
      <mode value="source"/>
    </input>
    <input>
      <name value="tgtBundle"/>
      <type value="LogicalBundle"/>
      <mode value="target"/>
    </input>
    <rule>
      <name value="setId"/>
      <source>
        <context value="src"/>
      </source>
      <target>
        <context value="tgtBundle"/>
        <contextType value="variable"/>
        <element value="logicalId"/>
        <transform value="uuid"/>
      </target>
    </rule>
    <rule>
      <name value="setType"/>
      <source>
        <context value="src"/>
      </source>
      <target>
        <context value="tgtBundle"/>
        <contextType value="variable"/>
        <element value="type"/>
        <transform value="copy"/>
        <parameter>
          <valueString value="transaction"/>
        </parameter>
      </target>
    </rule>
    <rule>
      <name value="entryLoop4Patient"/>
      <source>
        <context value="src"/>
        <element value="entry"/>
        <variable value="srcEntry"/>
        <condition value="srcEntry.resource.is(FHIR.Patient)"/>
      </source>
      <rule>
        <name value="addPatient"/>
        <source>
          <context value="srcEntry"/>
          <element value="resource"/>
          <variable value="srcResource"/>
        </source>
        <target>
          <contextType value="variable"/>
          <variable value="srcPatient"/>
          <transform value="evaluate"/>
          <parameter>
            <valueString value="%srcResource.as(FHIR.Patient)"/>
          </parameter>
        </target>
        <dependent>
          <name value="Patient"/>
          <variable value="srcPatient"/>
          <variable value="tgtBundle"/>
        </dependent>
      </rule>
    </rule>
  </group>
</StructureMap>