Guide d'implémentation du GT Standards et Interopérabilité pour les EDS
0.1.0 - ci-build
Guide d'implémentation du GT Standards et Interopérabilité pour les EDS - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
Draft as of 2024-10-08 |
Definitions for the OMOPSpecimen logical model.
Guidance on how to interpret the contents of this table can be found here
0. OMOPSpecimen | |
Definition | The specimen domain contains the records identifying biological samples from a person. |
Short | Specimen OMOP Table |
Logical Model | Instances of this logical model are not marked to be the target of a Reference |
2. OMOPSpecimen.specimen-id | |
Definition | Specimen Identifier |
Short | Specimen Identifier |
Control | 1..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
4. OMOPSpecimen.person-id | |
Definition | The person from whom the specimen is collected. |
Short | Person |
Control | 1..1 |
Type | Reference(Person OMOP Table) |
6. OMOPSpecimen.specimen-concept-id | |
Definition | Specimen |
Short | Specimen |
Control | 1..1 |
Type | Reference(Concept OMOP Table) |
8. OMOPSpecimen.specimen-type-concept-id | |
Definition | Specimen Type |
Short | Specimen Type |
Control | 1..1 |
Type | Reference(Concept OMOP Table) |
10. OMOPSpecimen.specimen-date | |
Definition | The date the specimen was collected. |
Short | Specimen Date |
Control | 1..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
12. OMOPSpecimen.specimen-datetime | |
Definition | Specimen Datetime |
Short | Specimen Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
14. OMOPSpecimen.quantity | |
Definition | The amount of specimen collected from the person. |
Short | Quantity |
Control | 0..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
16. OMOPSpecimen.unit-concept-id | |
Definition | The unit for the quantity of the specimen. |
Short | Unit |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
18. OMOPSpecimen.anatomic-site-concept-id | |
Definition | This is the site on the body where the specimen is from. |
Short | Anatomic Site |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
20. OMOPSpecimen.disease-status-concept-id | |
Definition | Disease Status |
Short | Disease Status |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
22. OMOPSpecimen.specimen-source-id | |
Definition | This is the identifier for the specimen from the source system. |
Short | Specimen Source |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
24. OMOPSpecimen.specimen-source-value | |
Definition | Specimen Source Value |
Short | Specimen Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
26. OMOPSpecimen.unit-source-value | |
Definition | Unit Source Value |
Short | Unit Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
28. OMOPSpecimen.anatomic-site-source-value | |
Definition | Anatomic Site Source Value |
Short | Anatomic Site Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
30. OMOPSpecimen.disease-status-source-value | |
Definition | Disease Site Source Value |
Short | Disease Site Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Guidance on how to interpret the contents of this table can be found here
0. OMOPSpecimen | |
Definition | The specimen domain contains the records identifying biological samples from a person. |
Short | Specimen OMOP Table |
Control | 0..* |
Is Modifier | false |
Logical Model | Instances of this logical model are not marked to be the target of a Reference |
2. OMOPSpecimen.specimen-id | |
Definition | Specimen Identifier |
Short | Specimen Identifier |
Control | 1..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
4. OMOPSpecimen.person-id | |
Definition | The person from whom the specimen is collected. |
Short | Person |
Control | 1..1 |
Type | Reference(Person OMOP Table) |
6. OMOPSpecimen.specimen-concept-id | |
Definition | Specimen |
Short | Specimen |
Control | 1..1 |
Type | Reference(Concept OMOP Table) |
8. OMOPSpecimen.specimen-type-concept-id | |
Definition | Specimen Type |
Short | Specimen Type |
Control | 1..1 |
Type | Reference(Concept OMOP Table) |
10. OMOPSpecimen.specimen-date | |
Definition | The date the specimen was collected. |
Short | Specimen Date |
Control | 1..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
12. OMOPSpecimen.specimen-datetime | |
Definition | Specimen Datetime |
Short | Specimen Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
14. OMOPSpecimen.quantity | |
Definition | The amount of specimen collected from the person. |
Short | Quantity |
Control | 0..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
16. OMOPSpecimen.unit-concept-id | |
Definition | The unit for the quantity of the specimen. |
Short | Unit |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
18. OMOPSpecimen.anatomic-site-concept-id | |
Definition | This is the site on the body where the specimen is from. |
Short | Anatomic Site |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
20. OMOPSpecimen.disease-status-concept-id | |
Definition | Disease Status |
Short | Disease Status |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
22. OMOPSpecimen.specimen-source-id | |
Definition | This is the identifier for the specimen from the source system. |
Short | Specimen Source |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
24. OMOPSpecimen.specimen-source-value | |
Definition | Specimen Source Value |
Short | Specimen Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
26. OMOPSpecimen.unit-source-value | |
Definition | Unit Source Value |
Short | Unit Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
28. OMOPSpecimen.anatomic-site-source-value | |
Definition | Anatomic Site Source Value |
Short | Anatomic Site Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
30. OMOPSpecimen.disease-status-source-value | |
Definition | Disease Site Source Value |
Short | Disease Site Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
Guidance on how to interpret the contents of this table can be found here
0. OMOPSpecimen | |
Definition | The specimen domain contains the records identifying biological samples from a person. |
Short | Specimen OMOP Table |
Control | 0..* |
Is Modifier | false |
Logical Model | Instances of this logical model are not marked to be the target of a Reference |
2. OMOPSpecimen.specimen-id | |
Definition | Specimen Identifier |
Short | Specimen Identifier |
Control | 1..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
4. OMOPSpecimen.person-id | |
Definition | The person from whom the specimen is collected. |
Short | Person |
Control | 1..1 |
Type | Reference(Person OMOP Table) |
6. OMOPSpecimen.specimen-concept-id | |
Definition | Specimen |
Short | Specimen |
Control | 1..1 |
Type | Reference(Concept OMOP Table) |
8. OMOPSpecimen.specimen-type-concept-id | |
Definition | Specimen Type |
Short | Specimen Type |
Control | 1..1 |
Type | Reference(Concept OMOP Table) |
10. OMOPSpecimen.specimen-date | |
Definition | The date the specimen was collected. |
Short | Specimen Date |
Control | 1..1 |
Type | date |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
12. OMOPSpecimen.specimen-datetime | |
Definition | Specimen Datetime |
Short | Specimen Datetime |
Control | 0..1 |
Type | dateTime |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
14. OMOPSpecimen.quantity | |
Definition | The amount of specimen collected from the person. |
Short | Quantity |
Control | 0..1 |
Type | integer |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
16. OMOPSpecimen.unit-concept-id | |
Definition | The unit for the quantity of the specimen. |
Short | Unit |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
18. OMOPSpecimen.anatomic-site-concept-id | |
Definition | This is the site on the body where the specimen is from. |
Short | Anatomic Site |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
20. OMOPSpecimen.disease-status-concept-id | |
Definition | Disease Status |
Short | Disease Status |
Control | 0..1 |
Type | Reference(Concept OMOP Table) |
22. OMOPSpecimen.specimen-source-id | |
Definition | This is the identifier for the specimen from the source system. |
Short | Specimen Source |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
24. OMOPSpecimen.specimen-source-value | |
Definition | Specimen Source Value |
Short | Specimen Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
26. OMOPSpecimen.unit-source-value | |
Definition | Unit Source Value |
Short | Unit Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
28. OMOPSpecimen.anatomic-site-source-value | |
Definition | Anatomic Site Source Value |
Short | Anatomic Site Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |
30. OMOPSpecimen.disease-status-source-value | |
Definition | Disease Site Source Value |
Short | Disease Site Source Value |
Control | 0..1 |
Type | string |
Primitive Value | This primitive element may be present, or absent, or replaced by an extension |