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Suicide Attempt

Presentation

We provide the SuicideAttemptFromICD10 class to extract visits linked to suicide attempt from ICD-10 codes.

Usage

As mentionned below, two algorithms ("Haguenoer2008" (default) and "X60-X84") are available

from eds_scikit.io import HiveData
data = HiveData(DBNAME)

from eds_scikit.phenotype import SuicideAttemptFromICD10

sa = SuicideAttemptFromICD10(data)
data = sa.to_data()

The final phenotype DataFrame is then available at data.computed["SuicideAttemptFromICD10_Haguenoer2008"] or data.computed["SuicideAttemptFromICD10_X60_X84"] depending on the used algorithm

Availables algorithms (values for "algo")

The ICD10 codes are available under SuicideAttemptFromICD10.ICD10_CODES

Returns the visits that have at least one ICD code that belongs to the range X60 to X84.

Returns the visits that follow the definiton of Haguenoer20081. This rule requires at least one Main Diagnostic (DP) belonging to S00 to T98, and at least one Associated Diagnostic (DAS) that belongs to the range X60 to X84.

Citation

When using algo="Haguenoer2008", you can get the BibTex of the corresponding article1 by calling

sa.cite()

@misc{haguenoer_tentatives_2008,
    title = {Épidémiologie des tentatives de suicide en région Centre},
    language = {fr},
    author = {Haguenoer, Ken and Caille, Agnès and Fillatre, Marc and Lecuyer, Anne Isabelle and Rusch, Emmanuel},
    year = {2008},
    pages = {4},
    howpublished = {\url{https://www.esante-centre.fr/portail_pro/minisite_25/media-files/56393/plaquette-2006-2009.pdf}}
}

Reference

Check the code reference here for a more detailled look.

  1. Ken Haguenoer, Agnès Caille, Marc Fillatre, Anne Isabelle Lecuyer, and Emmanuel Rusch. Épidémiologie des tentatives de suicide en région centre. \url https://www.esante-centre.fr/portail_pro/minisite_25/media-files/56393/plaquette-2006-2009.pdf, 2008. ↩↩

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